Microdon is a fly genus.
Microdon may also refer to the scientific names of several different species of fish:
- Cyclothone microdon
- Haplochromis microdon
- Lethrinus microdon
- Lethrinops microdon
- Pachystomias microdon
- Panna microdon, a species of Panna fish
- Pristis microdon
- Pseudotriakis microdon
- Salangichthys microdon
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